Attribution-ShareAlike 4.0 International (CC BY-SA 4.0) (558)

(No DOI)
Processed CTD data from the Mooring Cruise on the Algoa Voyage 199, June 2013

This is processed Conductivity, Temperature, Depth (CTD) data from the Mooring Cruise on the Algoa Voyage 199 from 29 June - 3 July, 2013. The area covered includes Slangkop, off of Cape Town, Western Cape, South Africa to Port Edward, south of Durban, KwaZulu-Natal, South Africa. This dataset was processed using older standards which may not align with international best practices and the standards currently adhered to by the Department of Forestry, Fisheries and the Environment (DFFE). The Department is re-processing and replacing data to ensure everything has the same format and is of the same quality and datasets will be marked as obsoleted once that is done. As such the user assumes the entire risk related to the use of these data in its current state and format. DFFE disclaims all warranties of the data whether expressed or implied, including without limitation, any warranties of merchantability or fitness for a particular purpose. For any concerns regarding the data, the...

(No DOI)
Raw SPAR data from the Mooring Cruise on the Algoa Voyage 199, June 2013

This is raw Surface Photosynthetically Active Radiation (SPAR) data from the Mooring Cruise on the Algoa Voyage 199 from 29 June - 3 July, 2013. The area covered includes Slangkop, off of Cape Town, Western Cape, South Africa to Port Edward, south of Durban, KwaZulu-Natal, South Africa.

DOI: 10.15493/dea.mims.20210310
Processed CTD discrete observations from the Africana Voyage 011, August 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here we present processed CTD discrete data from the upcast collected between 13 and 24 Aug 1983, during Voyage 011 on the Africana, in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa.

DOI: 10.15493/dea.mims.20210309
Processed CTD continuous observations from the Africana Voyage 011, August 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here we present processed downcast CTD continuous data collected between 13 and 24 August 1983, during Voyage 011 on the Africana, in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa.

DOI: 10.15493/dea.mims.20210223
Processed CTD continuous observations from the Africana Voyage 010, June 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here we present processed downcast CTD continuous data collected, between 18 June 1983 and 13 July 1983, during Voyage 010 on the Africana, in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa.

DOI: 10.15493/dea.mims.20210224
Processed CTD discrete observations from the Africana Voyage 010, June 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here we present processed CTD discrete data from the upcast collected, between 18 June 1983 and 13 July 1983, during Voyage 010 on the Africana, in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa.

DOI: 10.15493/dea.mims.01022027
Processed CTD continuous observations from the Africana Voyage 009, May 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here we present processed downcast CTD continuous data collected during Voyage 009 on the Africana, in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa, between 5 May 1983 and 29 May 1983.

DOI: 10.15493/dea.mims.01022028
Processed CTD discrete observations from the Africana Voyage 009, May 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here we present processed CTD discrete data from the upcast collected during Voyage 009 on the Africana, in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa, between 5 May 1983 and 29 May 1983.

DOI: 10.15493/dea.mims.01022022
Processed CTD continuous observations from the Africana Voyage 007, March 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here we present processed downcast CTD continuous data collected during Voyage 007 on the Africana, in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa, between 16 March 1983 and 21 March 1983.

DOI: 10.15493/dea.mims.01022023
Processed CTD discrete observations from the Africana Voyage 007, March 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here we present processed CTD discrete data from the upcast collected during Voyage 007 on the Africana, in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa, between 16 March 1983 and 21 March 1983.

DOI: 10.15493/dea.mims.26052362
Processed CTD continuous observations from the Africana Voyage 006, February 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here, we present processed downcast CTD continuous data collected between 22 February 1983 and 28 February 1983 during Voyage 006 on the Africana in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa.

DOI: 10.15493/dea.mims.26052363
Processed CTD discrete observations from the Africana Voyage 006, February 1983

Neil Brown MK3 and MK4 Conductivity-Temperature-Depth (CTD) instruments were used to measure pressure, temperature and conductivity through the water column during research and monitoring cruises between 1983 and 2000. Here, we present processed CTD discrete data from the upcast collected between 22 February 1983 and 28 February 1983 during Voyage 006 on the Africana in the Benguela Current Large Marine Ecosystem (BCLME) region on the west coast of South Africa.

(No DOI)
Raw SADCP data from the Integrated Ecosystem Programme: Southern Benguela (IEP:SB) on the Algoa Voyage 202, September 2013

This is raw ship mounted ADCP data from the Integrated Ecosystem Programme: Southern Benguela on the Algoa Voyage 202, 9 to 19 September, 2013. This was the pilot cruise for the IEP:SB for site determination and gear testing.The Integrated Ecosystem Programme: Southern Benguela is a multi-disciplinary, multi-institutional platform to undertake relevant science in the Southern Benguela; also functioning as a platform for collaboration and learning. All projects aim to develop an ecosystem indicator that can be used to effectively monitor and understand the Southern Benguela i.e physical, chemical, planktonic, microbial, seabird and benthic ecosystem indicators, used for ecosystem-based management.

(No DOI)
Raw TSG data from the St Helena Bay Monitoring Line (SHBML) on the Algoa Voyage 195, March 2013

This is raw Thermosalinograph (TSG) data from the St Helena Bay Monitoring Line, which now falls under the Integrated Ecosystem Programme: Southern Benguela, on the Algoa Voyage 196, 4 to 8 March, 2013.The St Helena Bay Monitoring Line was initiated as a BENEFIT-driven project on "shipboard monitoring" which linked with similar lines run in Namibia and Angola. The aims are to obtain seasonal and interannual information on the hydrology and productivity of the area. Data on harmful algal blooms, low oxygen water and intrusions of Agulhas Bank water along the west coast will also be collected. A long-term, multi-decadel time-series (from 1951 onward) of information already exists for this important region and has continued in the form of the IEP:SB to detect long-term changes in the hydrology and the plankton, which are important for the detection of regime shifts.

(No DOI)
Raw SADCP data from the St Helena Bay Monitoring Line (SHBML) on the Algoa Voyage 195, March 2013

This is raw Shipboard Acoustic Doppler Current Profiler (SADCP) data from the St Helena Bay Monitoring Line, which now falls under the Integrated Ecosystem Programme: Southern Benguela, on the Algoa Voyage 196, 4 to 8 March, 2013.The St Helena Bay Monitoring Line was initiated as a BENEFIT-driven project on "shipboard monitoring" which linked with similar lines run in Namibia and Angola. The aims are to obtain seasonal and interannual information on the hydrology and productivity of the area. Data on harmful algal blooms, low oxygen water and intrusions of Agulhas Bank water along the west coast will also be collected. A long-term, multi-decadel time-series (from 1951 onward) of information already exists for this important region and has continued in the form of the IEP:SB to detect long-term changes in the hydrology and the plankton, which are important for the detection of regime shifts.

(No DOI)
Raw SADCP data from the St Helena Bay Monitoring Line (SHBML) on the Algoa Voyage 194, February 2013

This is raw Shipboard Acoustic Doppler Current Profiler (SADCP) data from the St Helena Bay Monitoring Line February 2013 cruise (now under the Integrated Ecosystem Programme: Southern Benguela). The St Helena Bay Monitoring Line was initiated as a BENEFIT-driven project on "shipboard monitoring" which linked with similar lines run in Namibia and Angola. The aims are to obtain seasonal and interannual information on the hydrology and productivity of the area. Data on harmful algal blooms, low oxygen water and intrusions of Agulhas Bank water along the west coast will also be collected. A long-term, multi-decadel time-series (from 1951 onward) of information already exists for this important region and has continued in the form of the IEP:SB to detect long-term changes in the hydrology and the plankton, which are important for the detection of regime shifts.

(No DOI)
Raw TSG data from the St Helena Bay Monitoring Line (SHBML) on the Algoa Voyage 193, January 2013

This is raw Thermosalinograph (TSG) data from the St Helena Bay Monitoring Line January 2013 cruise (now under the Integrated Ecosystem Programme: Southern Benguela). The St Helena Bay Monitoring Line was initiated as a BENEFIT-driven project on "shipboard monitoring" which linked with similar lines run in Namibia and Angola. The aims are to obtain seasonal and interannual information on the hydrology and productivity of the area. Data on harmful algal blooms, low oxygen water and intrusions of Agulhas Bank water along the west coast will also be collected. A long-term, multi-decadel time-series (from 1951 onward) of information already exists for this important region and has continued in the form of the IEP:SB to detect long-term changes in the hydrology and the plankton, which are important for the detection of regime shifts.

(No DOI)
Raw CTD data from the St Helena Bay Monitoring Line (SHBML) on the Algoa Voyage 193, January 2013

This is raw Conductivity, Temperature, Depth (CTD) data from the St Helena Bay Monitoring Line January 2013 cruise (now under the Integrated Ecosystem Programme: Southern Benguela). The St Helena Bay Monitoring Line was initiated as a BENEFIT-driven project on "shipboard monitoring" which linked with similar lines run in Namibia and Angola. The aims are to obtain seasonal and interannual information on the hydrology and productivity of the area. Data on harmful algal blooms, low oxygen water and intrusions of Agulhas Bank water along the west coast will also be collected. A long-term, multi-decadel time-series (from 1951 onward) of information already exists for this important region and has continued in the form of the IEP:SB to detect long-term changes in the hydrology and the plankton, which are important for the detection of regime shifts.

(No DOI)
Raw SADCP data from the St Helena Bay Monitoring Line (SHBML) on the Algoa Voyage 193, January 2013

This is raw Shipboard Acoustic Doppler Current Profiler (SADCP) data from the St Helena Bay Monitoring Line January 2013 cruise (now under the Integrated Ecosystem Programme: Southern Benguela). The St Helena Bay Monitoring Line was initiated as a BENEFIT-driven project on "shipboard monitoring" which linked with similar lines run in Namibia and Angola. The aims are to obtain seasonal and interannual information on the hydrology and productivity of the area. Data on harmful algal blooms, low oxygen water and intrusions of Agulhas Bank water along the west coast will also be collected. A long-term, multi-decadel time-series (from 1951 onward) of information already exists for this important region and has continued in the form of the IEP:SB to detect long-term changes in the hydrology and the plankton, which are important for the detection of regime shifts.

DOI: 10.15493/dea.mims.26500019
Carbonate chemistry time-series from discrete sampling at thirteen sites in Algoa Bay, South Africa, 2018 - 2020

Coastal monthly carbonate chemistry data and other associated physico-chemical parameters from Algoa Bay, on the temperate south coast of South Africa. Eight offshore and five inshore sites were sampled. Temperature, salinity and dissolved oxygen were measured at each offshore site, and temperature was measured at each inshore site. At each offshore and inshore site, a single sea water sample was collected at the surface for later analysis of pH and total alkalinity (TA) in the laboratory. Remaining parameters of the carbonate system (including pCO2) were calculated in the software program CO2SYS (Lewis and Wallace, 1998) using pH and TA as input parameters. Temperature, salinity, silicate and phosphate concentrations were included in the calculations as supplemental data which may influence carbonate speciation.

DOI: 10.15493/DEA.MIMS.15712023
Simulated advection patterns of Engraulis encrasicolus and Sardinops sagax larvae across South Africa's inshore Marine Protected Areas

Larval anchovy and sardine dispersal patterns in South Africa's exclusive economic zone (2010 - 2014) by Rasehlomi et al. (2025), published in Frontiers in Marine Science, investigates the dispersal of larval anchovy and sardine (https://doi.org/10.3389/fmars.2024.1508479). We simulated larval dispersal patterns using a simplified model within the Java-based ICHTHYOP particle tracking tool. This model compared outputs from the 3km grid resolution CROCO model and the 8km-resolution Global Ocean Reanalyses (GLORYS). Virtual particles were released from the surface of 14 inshore Marine Protected Areas (MPAs), from iSimangaliso MPA (on the east coast) including the Agulhas Bank (on the south) to Childs Bank MPA (on the west coast). Releases occurred on October 1st for five consecutive years, starting in 2010. These particles drifted for 30 days, with their positions recorded every 30 minutes. Particles that exited the model's boundaries or became stranded on beaches were excluded from...

(No DOI)
Hybrid Coordinate Ocean Model (HYCOM) EnOI Version 1.1 Raw (L3R) Regional Agulhas 10km Ocean State Estimate 2009

The greater Agulhas Current is one of the most energetic current systems in the global ocean. It plays a fundamental role in determining the mean state and variability of the regional marine environment, affecting its resources and ecosystem, the regional weather and the global climate on a broad range of temporal and spatial scales. In the absence of a coherent in-situ and satellite-based observing system in region, modelling and data assimilation techniques play a crucial role in both furthering and quantitative understanding and proving better forecasts of this complicated western boundary current system.

DOI: 10.15493/DEA.MIMS.26052100
Wirewalker wave-powered profilers from three nearshore moorings in St Helena Bay, South Africa, Feb-Apr 2011

Concurrent nearshore measurements of temperature, salinity, and chlorophyll fluorescence from three moorings offshore of Elands Bay, within St Helena Bay, Southern Benguela, in water depths of ~22 m (mooring 3), ~50 m (mooring 2) and ~62 m (mooring 1). The data were originally presented in "Lucas, A. J., Pitcher, G. C., Probyn, T. A., & Kudela, R. M. (2014, March). The influence of diurnal winds on phytoplankton dynamics in a coastal upwelling system off south -western Africa. Deep Sea Research Part II: Topical Studies in Oceanography,101,50–62. doi: 10.1016/j.dsr2.2013.01.016", and were further investigated in "Fearon, G., Herbette, S., Veitch, J., Cambon, G., Lucas, A. J., Lemarié, F., & Vichi, M. (2020). Enhanced vertical mixing in coastal upwelling systems driven by diurnal‐inertial resonance: Numerical experiments. Journal of Geophysical Research: Oceans, 125, e2020JC016208. https://doi.org/10.1029/2020JC016208".

DOI: 10.15493/DEA.MIMS.26052101
Bottom-mounted Acoustic Doppler Current Profilers (ADCP) from three nearshore moorings in St Helena Bay, South Africa, Feb-Apr 2011

Concurrent nearshore measurements of current velocity from three moorings offshore of Elands Bay, within St Helena Bay, Southern Benguela, in water depths of ~22 m (mooring 3), ~50 m (mooring 2) and ~62 m (mooring 1). The data were originally presented in "Lucas, A. J., Pitcher, G. C., Probyn, T. A., & Kudela, R. M. (2014, March). The influence of diurnal winds on phytoplankton dynamics in a coastal upwelling system off south-western Africa. Deep Sea Research Part II: Topical Studies in Oceanography,101,50–62. doi: 10.1016/j.dsr2.2013.01.016", and were further investigated in "Fearon, G., Herbette, S., Veitch, J., Cambon, G., Lucas, A. J., Lemarié, F., & Vichi, M. (2020). Enhanced vertical mixing in coastal upwelling systems driven by diurnal‐inertial resonance: Numerical experiments. Journal of Geophysical Research: Oceans, 125, e2020JC016208. https://doi.org/10.1029/2020JC016208".

DOI: 10.15493/DEA.MIMS.26052102
A stand alone 1D-vertical version of the Coastal and Regional Ocean COmmunity model (CROCO)

A 1D-vertical model originally developed by Florian Lemarie to test different vertical mixing parameterisations implemented in the full version of the CROCO source code. The model is run as a python script, simplifying the setup and testing of different 1D model configurations. The python script loops through time and calls a 1D version of the CROCO Fortran code at each time-step. A description of the input variables and how to implement the code is provided in scm_oce.pdf. Some examples of how the model has been used to benchmark oceanic vertical mixing parameterization against standard test cases is provided in comodo_params.pdf. The provided example configuration is described in "Fearon, G., Herbette, S., Veitch, J., Cambon, G., Lucas, A. J., Lemarié, F., & Vichi, M. (2020). Enhanced vertical mixing in coastal upwelling systems driven by diurnal‐inertial resonance: Numerical experiments. Journal of Geophysical Research: Oceans, 125, e2020JC016208. https://doi.org/10.1029/2020JC016208".

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